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4M.5.DEMO: TEST: TopMed Open Sandboxes

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Description

Demonstrates a cloud-agnostic sandbox that allows the user to interactively explore and analyze curated clinical TOPMED data.

What they achieved

The i2b2/tranSMART interface allows users to explore curated clinical data in an interactive website. The user can use a pre-written Jupyter notebook to access and analyze TOPMed data.

Why is this valuable?

Providing interactive exploration and 'push button' analysis of data is an important capability for the Commons to provide for users who aren’t computationally savvy. This demo is an example of the type of interactive application that could be possible to build on top of the Full Stacks.